- #Cellprofiler load time series multi page tiff software#
- #Cellprofiler load time series multi page tiff code#
STK, LSM, FluoView, SGI, SEQ, GEL, and OME-TIFF, are custom extensions defined by Molecular Devices (Universal Imaging Corporation), Carl Zeiss MicroImaging, Olympus, Silicon Graphics International, Media Cybernetics, Molecular Dynamics, and the Open Microscopy Environment consortium respectively. BigTIFF allows for files greater than 4 GB.
TIFF, the Tagged Image File Format aka Thousands of Incompatible File Formats, is under the control of Adobe Systems. Only primary info records are read for STK, FluoView, MicroManager, and NIH Image formats. Specifically, reading JPEG and CCITT compressed image data, chroma subsampling, or EXIF, IPTC, GPS, and XMP metadata is not implemented. Only a subset of the TIFF specification is supported, mainly uncompressed and losslessly compressed 2**(0 to 6) bit integer, 16, 32 and 64-bit float, grayscale and RGB(A) images, which are commonly used in bio-scientific imaging. Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, STK, LSM, NIH, SGI, ImageJ, MicroManager, FluoView, SEQ and GEL files. """Read image and meta data from (bio)TIFF files.
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#Cellprofiler load time series multi page tiff software#
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#Cellprofiler load time series multi page tiff code#
# Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # * Redistributions of source code must retain the above copyright # notice, this list of conditions and the following disclaimer. #!/usr/bin/env python # -*- coding: utf-8 -*- # tifffile.py # Copyright (c) 2008-2016, Christoph Gohlke # Copyright (c) 2008-2016, The Regents of the University of California # Produced at the Laboratory for Fluorescence Dynamics # All rights reserved.